This function converts the genetic data of an ecogen object in a hierfstat data frame.
ecogen2hierfstat(eco, pop = NULL, columns_to_numeric = FALSE, nout = 3, recode = c("column", "all"), ...)
eco | Object of class "ecogen". |
---|---|
pop | The name of the S slot column with the groups for the hierfstat data frame. |
columns_to_numeric | Recode the genetic data into numeric format? If TRUE,
the functions performs the correction via |
recode | If recoding is TRUE, it should be performed individually (e.g., microsatellite data) for each column, or overall (e.g., SNPs). Default: "column". |
... | Additional parameters passed to |
# NOT RUN { data(eco.test) hiereco <- ecogen2hierfstat(eco, "pop") require("hierfstat") basic.stats(hiereco) # }